Vulpetti, Anna and Dalvit, Claudio (2021) Hydrogen Bond Acceptor Propensity of different Fluorine Atom Types: An Analysis of Experimentally- and Computationally-derived Parameters. Chemistry (Weinheim an der Bergstrasse, Germany), 27 (34). pp. 8764-8773. ISSN 15213765

Abstract

The propensity of organic fluorine acting as a weak hydrogen bond acceptor (HBA) in intermolecular and intramolecular interactions has been the subject of many experimental and theoretical studies often reaching different conclusions. Over the last few years new and stronger evidences have emerged for the direct involvement of fluorine in weak hydrogen bond (HB) formation. However, not all the fluorine atom types can act as weak HBA. In this work we have analyzed the differential HBA propensity of various types of fluorine atoms with a particular emphasis for the different types of alkyl fluorides. This is carried out by evaluating ab initio computed parameters, experimental 19 F NMR chemical shifts and small molecule crystallographic structures (extracted from the CSD database). According to this analysis, shielded (with reference to the 19 F NMR chemical shift) mono-fluorinated alkyl motifs display the highest HBA propensity in agreement with solution studies. Although much weaker than other well characterized HB complexes, the fragile HBs formed by these fluorinated motifs have important implications for the chemical-physical and structural properties of the molecules, chemical reactions and protein/ligand recognition.

Item Type:	Article
Keywords:	19F NMR spectroscopy COSMO polarization charge density fluorinated drugs and clinical/preclinical compounds Hydrogen Bond (HB) small molecule X-ray structures
Date Deposited:	01 Jul 2021 00:45
Last Modified:	01 Jul 2021 00:45
URI:	https://oak.novartis.com/id/eprint/44224