In silico identification of bioisosteric functional groups.
Tools
Tools
Ertl, Peter (2007) In silico identification of bioisosteric functional groups. Current Opinion in Drug Discovery & Development, 10 (3). pp. 281-288. ISSN 1367-6733
Abstract
Bioisosteric replacement is a standard technique that is used in medicinal chemistry to design analogs of bioactive molecules with similar activity and with additional improved characteristics. However, successful bioisosteric design requires significant prior chemical knowledge, and the identification of a replacement group with an optimal balance of steric, hydrophobic, electronic and hydrogen-bonding properties that all influence ligand-receptor interactions usually requires a demanding procedure of trial and error. In this article, various methods that can help medicinal chemists to identify bioisosteric analogs are reviewed, beginning with classical techniques using experimental group properties. Methods to find bioisosteric pairs based on the analysis of large molecular databases are discussed. Various descriptors to characterize properties of functional groups are described, and methods to identify bioisosteric replacement by conducting property similarity search are presented. Examples of tools that help chemists to navigate within the group functional property space are also provided.
| Item Type: | Article |
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| Additional Information: | author can archive post-print (ie final draft post-refereeing); Publisher's version/PDF may be used |
| Keywords: | Bioisosteric design; bioisosteric replacement; functional group; spacer; substituents; substituent properties |
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| Date Deposited: | 13 Oct 2015 13:16 |
| Last Modified: | 13 Oct 2015 13:16 |
| URI: | https://oak.novartis.com/id/eprint/1685 |